PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G098800.1.p
Common NameGLYMA_02G098800, Glyma02g10940.1, LOC100799501
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 372aa    MW: 40794.6 Da    PI: 8.3496
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G098800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.31.3e-31211266156
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                          k+r++W++eLH+rF++a++qLGG++ AtPk+i+elmkv+gLt+++vkSHLQk+Rl+
  Glyma.02G098800.1.p 211 KQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLH 266
                          79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.783208268IPR017930Myb domain
SuperFamilySSF466894.54E-18209269IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-28209269IPR009057Homeodomain-like
TIGRFAMsTIGR015575.1E-27211266IPR006447Myb domain, plants
PfamPF002491.2E-6213263IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MQFAEKMQPL KMGFREYIEA LEEERKKIQV FPKELPLSLE LVTQAIEACR QQLCGTVAEY  60
NLNAQSECSE QTSTDGPVFE EFIIPIKKKA SQASVEEDDD EEHSHKHTKT TTDKKKSDWL  120
RSVQLWNPNP PPTKEDVVPR KTNVVEVKRN GGGAFQPFQR EEKSGVSKAN NNNEASAIGK  180
APSSPPVPAT SYTGPVRVDS KKEEKGDAQR KQRRCWSQEL HKRFLHALQQ LGGADSATPK  240
QIRELMKVDG LTNDEVKSHL QKFRLHTRRS PIIHNSASSQ AGSLFLVGNI FVQPPEYATS  300
SASGGELTTA TPAAPTGIYA PVAAHLPAGT HTSPIMKHSH SPSEEKNNHS VHSNSPASSS  360
STHTITTSPP A*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.261430.0cotyledon| leaf| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G098800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311800.0KT031180.1 Glycine max clone HN_CCL_160 MYB/HD-like transcription factor (Glyma02g10940.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003518679.10.0transcription factor HHO2
TrEMBLI1JDW00.0I1JDW0_SOYBN; MYB/HD-like transcription factor
STRINGGLYMA02G10940.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39183363
Representative plantOGRP54151221
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.19e-73G2-like family protein
Publications ? help Back to Top
  1. Chai C, et al.
    Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance.
    BMC Genomics, 2015. 16: p. 596
    [PMID:26268547]