 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.02G051900.1.p |
Common Name | GLYMA_02G051900, LOC100789129 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
SRS |
Protein Properties |
Length: 329aa MW: 35460.7 Da PI: 7.3971 |
Description |
SRS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.02G051900.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF702 | 213.1 | 6.5e-66 | 115 | 259 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstkls 92
+g++sCqdCGnqakkdC h+RCRtCCksrg+dC+thvkstWvpa+krrerqq+laa+++++ +e++++++r+ +++ + +s+t+l+
Glyma.02G051900.1.p 115 EGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKSTWVPASKRRERQQALAALQQQQ----QEQQQQQQRDISKRPRDPTSCTRLP 200
6889***************************************************997776....4456666777777788889999999 PP
DUF702 93 saeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
s+ e ++P+ vss+a frcvrvs v+d+++ +aYqtavsigGhvfkGiLyd+G+e+
Glyma.02G051900.1.p 201 SSGL---EEEGNFPSVVSSPAEFRCVRVSCVEDADDRYAYQTAVSIGGHVFKGILYDYGPEN 259
8754...46778************************************************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MAGLFSLGGG GGGGRGNNNN NQSSEIPPAE TLFWYSSKND DVSSFHRGFE LWNQQDQHHH 60 HHHHVMHPHA RPLLQRDLYS SGVGPSRGGG GVSDDDHSSS RSAALVAMRA AAAAEGGISC 120 QDCGNQAKKD CPHMRCRTCC KSRGYDCQTH VKSTWVPASK RRERQQALAA LQQQQQEQQQ 180 QQQRDISKRP RDPTSCTRLP SSGLEEEGNF PSVVSSPAEF RCVRVSCVED ADDRYAYQTA 240 VSIGGHVFKG ILYDYGPENN NHNNSNNNSN NNYTAGETSA SVVAAAQPLN LAAISSAALV 300 DTSSLYSAPV NAFMAGGSGT QFFPHTRS*
|
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT3G51060.1 | 4e-57 | Lateral root primordium (LRP) protein-related |