PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.02G025500.1.p
Common NameGLYMA_02G025500, LOC100782014
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 261aa    MW: 28231.2 Da    PI: 6.3189
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.02G025500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.3e-11143190455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++ +L++l+P +    +k   Ka +L + ++YI+sLq
  Glyma.02G025500.1.p 143 SHSLAERARREKISERMKTLQDLVPGC----NKVIGKALVLDEIINYIQSLQ 190
                          8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.14E-10137194No hitNo description
SuperFamilySSF474591.2E-17137207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.082139189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-18139208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-8143190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-10145195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MDPAAIMNGA ANTTSFHLSE IWQFPPPNSP DALGLRRPHF AHGSFADFAP GPTRDADPAS  60
IAHKKPRHAA GEEEESAKGA STTNAVDEGG GGDGKRIKAS ESGEGGRENS SGKPAEQSGK  120
PPSEPPKQDY IHVRARRGQA TDSHSLAERA RREKISERMK TLQDLVPGCN KVIGKALVLD  180
EIINYIQSLQ RQAEFLSMKL EAVNSRMESG IEVFPPKDFD QQTFDTTDMP FASQATREYS  240
RGSSSEWLHM QVGGGFERAT *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.268930.0hypocotyl| seed coat
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.02G025500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003519229.10.0transcription factor BHLH094 isoform X1
RefseqXP_028193965.10.0transcription factor BHLH094-like isoform X1
SwissprotQ69WS35e-74BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A445LIP40.0A0A445LIP4_GLYSO; Transcription factor BHLH094 isoform A
TrEMBLA0A445LIR30.0A0A445LIR3_GLYSO; Transcription factor BHLH094 isoform B
TrEMBLK7K6270.0K7K627_SOYBN; Uncharacterized protein
STRINGGLYMA02G02942.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117134105
Representative plantOGRP5816313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-79BIG PETAL P