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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.01G194600.2.p |
Common Name | GLYMA_01G194600, LOC778165 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB_related |
Protein Properties |
Length: 299aa MW: 32444.7 Da PI: 10.5028 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.01G194600.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 34.3 | 5.5e-11 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
+++WT+eE+ l+ +v ++G g W+tI R+ ++k++w++
Glyma.01G194600.2.p 5 KQKWTAEEEAALKAGVVKHGAGKWRTILTDPEfssilRMRSNVDLKDKWRN 55
79***********************************9***********99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006334 | Biological Process | nucleosome assembly |
GO:0009651 | Biological Process | response to salt stress |
GO:0009723 | Biological Process | response to ethylene |
GO:0009733 | Biological Process | response to auxin |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009739 | Biological Process | response to gibberellin |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0031627 | Biological Process | telomeric loop formation |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0000784 | Cellular Component | nuclear chromosome, telomeric region |
GO:0000786 | Cellular Component | nucleosome |
GO:0005730 | Cellular Component | nucleolus |
GO:0003691 | Molecular Function | double-stranded telomeric DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043047 | Molecular Function | single-stranded telomeric DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MGAPKQKWTA EEEAALKAGV VKHGAGKWRT ILTDPEFSSI LRMRSNVDLK DKWRNINVTA 60 IWGSRQKAKL ALKKNLLPST KIDNNHLALS TVVQRDKEVA NPKPLAVSSG TSPNSKEKIS 120 KLQNFQLDNL ILESIIKLKE PRGSDQAAIA AYIEDQYCST PTLRKLLSTK LKHMVASGKL 180 MKVKHKYRIA TNLTISEKRR CSSLLLLEGR PKDSPKAEKT GVNILSKSEI DAELSKMKGV 240 TPQEAAAAAA KAVAEAEAAI AEAEAAAREA DAAEAEAEAA RVFAKAAMKA LKCKTLRI*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:15060584}. |
Functional Description ? help
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Source |
Description |
UniProt | Binds preferentially double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235306 | 1e-168 | AC235306.1 Glycine max strain Williams 82 clone GM_WBb0068C17, complete sequence. |