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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.01G134200.1.p |
| Common Name | GLYMA_01G134200, LOC100776462 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
C2H2 |
| Protein Properties |
Length: 366aa MW: 40460.3 Da PI: 4.8223 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.01G134200.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 10.9 | 0.0015 | 4 | 26 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+kC+ C +sF + L H+r+H
Glyma.01G134200.1.p 4 HKCKLCLRSFANGRALGGHMRSH 26
79********************9 PP
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| 2 | zf-C2H2 | 12.2 | 0.00054 | 221 | 243 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
ykC+ C k+F++ L H +H
Glyma.01G134200.1.p 221 YKCETCEKVFRSYQALGGHRASH 243
9***********99999998887 PP
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| Protein Features
? help Back to Top |
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| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| Pfam | PF13912 | 2.2E-7 | 4 | 27 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.074 | 4 | 26 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 10.346 | 4 | 31 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 6 | 26 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF13912 | 2.9E-11 | 220 | 245 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 2.81E-8 | 220 | 296 | No hit | No description |
| PROSITE profile | PS50157 | 10.201 | 221 | 248 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.029 | 221 | 243 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE pattern | PS00028 | 0 | 223 | 243 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF13912 | 1.6E-10 | 274 | 296 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.22 | 274 | 296 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 9.286 | 274 | 296 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 276 | 296 | IPR007087 | Zinc finger, C2H2 |
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| GO:0046872 | Molecular Function | metal ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MEKHKCKLCL RSFANGRALG GHMRSHMLNL PVPPKQSEFV PIQLSFEADS SPSQSSSSFY 60
GLRENPKKSF RFADPEFAFA AADTGSVILQ DRESETESSR NPTRTRSKRA WQLGGDGGGG 120
GGGSGESEKK IMKVCKISKT NESASSVSDT TREEDVAFCL MMLSRDKWKE ENINNLLYDH 180
DQDDDEDEED DEEDENNEDD DGYESEEKSL KKSNNKVRGR YKCETCEKVF RSYQALGGHR 240
ASHKKIKLNN NNNNNNNNEG ELEVQHVVVE KKIHECPVCF RVFASGQALG GHKRTHVIGS 300
STAATTVSVR SSVATVSVRT ASTTRVGDSL IDLNLPAPVD DDEEEEEDVS QFDDSAVSDA 360
EFVKL*
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