PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.01G086700.1.p
Common NameGLYMA_01G086700, LOC100819750
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 380aa    MW: 41978.1 Da    PI: 7.797
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.01G086700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.31.3e-31211266156
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                          k+r++W++eLH+rF++a++qLGG++ AtPk+i+elmkv+gLt+++vkSHLQk+Rl+
  Glyma.01G086700.1.p 211 KQRRCWSQELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLH 266
                          79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.6E-28208269IPR009057Homeodomain-like
PROSITE profilePS5129412.783208268IPR017930Myb domain
SuperFamilySSF466896.81E-18209269IPR009057Homeodomain-like
TIGRFAMsTIGR015575.2E-27211266IPR006447Myb domain, plants
PfamPF002491.2E-6213263IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MQFAQKMQPL KMGFLQYIEA LEEERRKIQV FPKELPLSLE LVTQAIEACR QQLAGTVAEY  60
NLNGQSECSE QTSTDGPVFE EFIPLKKRAS QDSVEEEDED EEHFHKHKKT ATDKKKSDWL  120
RSVQLWNPNP PPTKEDVVVP RKTDVVEVKR NGGAFQPFQR EEKSGDAKAS INNDASAIGK  180
APSSPPVPAT SSTGPVRVEN KKEEKGQAQR KQRRCWSQEL HKRFLHALQQ LGGADSATPK  240
QIRELMKVDG LTNDEVKSHL QKFRLHTRRS PIIHNNASSQ AGPLFLVGNI FVQPPEYAAV  300
ATTSTASGEE LTTVTTTTAP TGIYAPVAAH PPAVTHTLPI MKQKEHSHSE ERPNHSVLSN  360
SPASSSSTHT ITTSPPVPN*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.368580.0leaf| somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.01G086700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311800.0KT031180.1 Glycine max clone HN_CCL_160 MYB/HD-like transcription factor (Glyma02g10940.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003516846.10.0transcription factor HHO2
RefseqXP_028234117.10.0transcription factor HHO2-like
TrEMBLA0A0B2RK220.0A0A0B2RK22_GLYSO; Transcription factor HHO3
TrEMBLI1J6P80.0I1J6P8_SOYBN; Uncharacterized protein
STRINGGLYMA01G21900.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39183363
Representative plantOGRP54151221
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.13e-78G2-like family protein