PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.01G084200.3.p
Common NameGLYMA_01G084200
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 437aa    MW: 48553.6 Da    PI: 6.6803
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.01G084200.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.61.7e-10154189742
                          HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                           rr+++NReAAr+sR+RKka++++Le    +L +  
  Glyma.01G084200.3.p 154 LRRLAQNREAARKSRLRKKAYVQQLESSRVKLVQLE 189
                          59************************8655555444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.0E-6148217IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.8E-8154194No hitNo description
CDDcd147081.30E-22154204No hitNo description
SuperFamilySSF579596.88E-7154195No hitNo description
PROSITE patternPS000360155170IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.531155194IPR004827Basic-leucine zipper domain
PfamPF001702.3E-7155190IPR004827Basic-leucine zipper domain
PfamPF141448.7E-29235309IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MKNMQGFKTA QPSSQQLYCH SSFLLRGNDP NQNPARFSDL GEHHHFSAVF HQEDAADLSS  60
SSMFSVKSSN VVGGSNMQYG TLNTNVGHAE IGSSGGGCMD TRQQLMYHKG VTMAALPLGN  120
GQVENWADSG KADNSQQTDD TSTDIDTDDI IPTLRRLAQN REAARKSRLR KKAYVQQLES  180
SRVKLVQLEQ ELQRARQQGI FIATPGDQGH LAVGNGALAF DIDYAHWVDE HQRLLNDLRT  240
AVNSQMSDSD LHILVDSVMA HYNELFRLKS LGTKADVLHI HNGMWKTPVE RCFMWLGGFR  300
SSELLKIIKN HLEPLTDQQL MGIYNLQQSS QQAEDALSQG LEALQQSLVE TLSSISLGPT  360
DSGNVVDYMG QMALAMGKLA DLESFVRQAD LLKQQTLQQL QRILTTRQTA RALLVQTDYI  420
SRLRALSSLW LARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.01G084200.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014629587.10.0transcription factor TGA2.2 isoform X2
RefseqXP_028233787.10.0transcription factor TGA2.2-like isoform X2
SwissprotQ6IVC21e-161TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLA0A445M0E60.0A0A445M0E6_GLYSO; Transcription factor TGAL1 isoform C
TrEMBLK7K2P00.0K7K2P0_SOYBN; Uncharacterized protein
STRINGGLYMA01G21120.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-114bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]