PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 487aa MW: 54309.3 Da PI: 7.7994

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.01G084200.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.4	2.1e-10	202	239	5	42
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 k rr+++NReAAr+sR+RKka++++Le +L + Glyma.01G084200.1.p 202 KTLRRLAQNREAARKSRLRKKAYVQQLESSRVKLVQLE 239 788*************************8655555444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.1E-7	191	244	No hit	No description
SMART	SM00338	2.2E-8	198	267	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.22	200	244	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.7E-7	202	240	IPR004827	Basic-leucine zipper domain
CDD	cd14708	1.05E-23	202	254	No hit	No description
SuperFamily	SSF57959	9.38E-7	202	245	No hit	No description
PROSITE pattern	PS00036	0	205	220	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.0E-28	285	359	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence Send to blast
MPFSSQRHSR IFLPSHTSLF LFSLMKNMQG FKTAQPSSQQ LYCHSSFLLR GNDPNQNPAR 60 FSDLGEHHHF SAVFHQEDAA DLSSSSMFSV KSSNVVGGSN MQYGTLNTNV GHAEIGSSGG 120 GCMDTRQQLM YHKGVTMAAL PLGNGQVENW ADSGKADNSQ QTDDTSTDID TDDIIPCNRV 180 KNGTRMVVHS KDETKVKPGD QKTLRRLAQN REAARKSRLR KKAYVQQLES SRVKLVQLEQ 240 ELQRARQQGI FIATPGDQGH LAVGNGALAF DIDYAHWVDE HQRLLNDLRT AVNSQMSDSD 300 LHILVDSVMA HYNELFRLKS LGTKADVLHI HNGMWKTPVE RCFMWLGGFR SSELLKIIKN 360 HLEPLTDQQL MGIYNLQQSS QQAEDALSQG LEALQQSLVE TLSSISLGPT DSGNVVDYMG 420 QMALAMGKLA DLESFVRQAD LLKQQTLQQL QRILTTRQTA RALLVQTDYI SRLRALSSLW 480 LARPRE*

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence Send to blast

MPFSSQRHSR IFLPSHTSLF LFSLMKNMQG FKTAQPSSQQ LYCHSSFLLR GNDPNQNPAR  60
FSDLGEHHHF SAVFHQEDAA DLSSSSMFSV KSSNVVGGSN MQYGTLNTNV GHAEIGSSGG  120
GCMDTRQQLM YHKGVTMAAL PLGNGQVENW ADSGKADNSQ QTDDTSTDID TDDIIPCNRV  180
KNGTRMVVHS KDETKVKPGD QKTLRRLAQN REAARKSRLR KKAYVQQLES SRVKLVQLEQ  240
ELQRARQQGI FIATPGDQGH LAVGNGALAF DIDYAHWVDE HQRLLNDLRT AVNSQMSDSD  300
LHILVDSVMA HYNELFRLKS LGTKADVLHI HNGMWKTPVE RCFMWLGGFR SSELLKIIKN  360
HLEPLTDQQL MGIYNLQQSS QQAEDALSQG LEALQQSLVE TLSSISLGPT DSGNVVDYMG  420
QMALAMGKLA DLESFVRQAD LLKQQTLQQL QRILTTRQTA RALLVQTDYI SRLRALSSLW  480
LARPRE*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.01G084200.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014629584.1	0.0	transcription factor TGA2.2 isoform X1
Refseq	XP_028233780.1	0.0	transcription factor TGA2.2-like isoform X1
Swissprot	Q6IVC2	1e-162	TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBL	A0A0R0LE00	0.0	A0A0R0LE00_SOYBN; Uncharacterized protein
STRING	GLYMA01G21120.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6022	31	49
Representative plant	OGRP722	16	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68640.1	1e-123	bZIP family protein

Link Out ? help Back to Top
Phytozome	Glyma.01G084200.1.p
Entrez Gene	100777181

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]