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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.01G051700.1.p |
| Common Name | GLYMA_01G051700, LOC100787150 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
MYB |
| Protein Properties |
Length: 317aa MW: 35752.6 Da PI: 8.9662 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.01G051700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 60.6 | 3.3e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT+eEd++lv +v+++G g+W++++ + g+ R++k+c++rw +yl
Glyma.01G051700.1.p 14 KGLWTPEEDKKLVAYVEKHGHGNWRSVPDKAGLERCGKSCRLRWINYL 61
678*******************************************97 PP
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| 2 | Myb_DNA-binding | 49.3 | 1.2e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++ eEd +++++++lG++ W+ Ia++++ +Rt++++k++w++
Glyma.01G051700.1.p 67 RGNFSMEEDHTIIQLHALLGNK-WSIIAAHLP-RRTDNEIKNYWNT 110
89********************.*********.***********97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 317 aa
Download sequence Send
to blast |
MGRMPCCEKG GLKKGLWTPE EDKKLVAYVE KHGHGNWRSV PDKAGLERCG KSCRLRWINY 60
LKPDIKRGNF SMEEDHTIIQ LHALLGNKWS IIAAHLPRRT DNEIKNYWNT NVKKRLIRMG 120
LDPVTHKPIK PNTFERYGGG HGQFKNTINT NHVAQWESAR MEAEARGSVL QVGSHSSHQP 180
QLVLSKIPTQ PCPSSSDSVS TKHNTVYNMY ALVLATNHDP LWPVSPLSIP GWKVPAVSTN 240
VGQFTNTGSS LSYESDVNVT ETNSQIQKIP ENYLSNLQDE DIMVAVEAFR TIRCESILEL 300
FRGWNDMEGL NKQSFF*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in trichomes, stems, carpels, petals and stamens. {ECO:0000269|PubMed:18805951}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015043 | 8e-50 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
