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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.01G043300.1.p |
Common Name | GLYMA_01G043300, LOC100797911 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
WRKY |
Protein Properties |
Length: 510aa MW: 56113.3 Da PI: 6.3656 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.01G043300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.7 | 7.6e-31 | 196 | 255 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK+ kg+++pr+YYrCt + +Cpv+k+v+r+aed +++++tYeg+Hnh+
Glyma.01G043300.1.p 196 MNDGCQWRKYGQKMAKGNPCPRAYYRCTASpSCPVRKQVQRCAEDMSILITTYEGTHNHP 255
58**************************999****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 510 aa
Download sequence Send
to blast |
MKRSYTVLVM EDNDFLDSNG DEEIDVKDQN LESAKGEKGE TREENKMLEF YGILHHDKPD 60 DATNAKGVFS HIEENEESEL VSLSLGISIS KGKPSKNEKM INNGIEKRED EDVHKRLVLG 120 LDINLDPVDQ DELAANNSTP ESSFGEGGKE DEPTEMWPPS KVSKTMKSED KSEASPHYQP 180 KKTRVSIRAR CDTQTMNDGC QWRKYGQKMA KGNPCPRAYY RCTASPSCPV RKQVQRCAED 240 MSILITTYEG THNHPLPMSA TAMACTTSAA ASMLQSPSLS SQHGLVDSAI SSIINSSAAN 300 YYNPNNALNF STHQVSRPNQ FYFSNSSIST LNSHPTITLD LTAPPTSSNS SFTHMPKYSS 360 TNLNFSSGFS PLHSSMPQSP WSSYNYFNSG TLSQNRKHGG NYLLNTGNQN QPHSLGNLHQ 420 PIYMRSNTIS QHSLPDPIVA ATKAITSNPK FQSALATALT TYVGNEAGGG RLRENHVLES 480 AELMNLKLCS ENSIGNSSIV QLPLLEQWK*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015043 | 1e-102 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |