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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.01G039200.1.p |
Common Name | GLYMA_01G039200 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 265aa MW: 28888.2 Da PI: 6.8082 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.01G039200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 33 | 1.1e-10 | 147 | 194 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++++P + +k Ka +L + ++YI+sLq
Glyma.01G039200.1.p 147 SHSLAERARREKISERMKILQDIVPGC----NKVIGKALVLDEIINYIQSLQ 194
8*************************9....677*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MDPAAMMNGG ANPTSYHLSE IWQFPPPNAP DELGLRRPHF THGFADFAPD PTRDAVPGRD 60 PASIAQKKRR DASAEEEESA KGASTTNAVN EGGGVGDGKR VKTSESGKGE GETSSGKLAE 120 QSGKPPSEPP KQDYIHVRAR RGQATDSHSL AERARREKIS ERMKILQDIV PGCNKVIGKA 180 LVLDEIINYI QSLQRQVEFL SMKLEAVNSR LAPRIEVFPP KDFDQQTFDT TGMPFASQAT 240 REYSRGSSPE WLHMQVGGGY ERAT*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.21038 | 0.0 | cotyledon| flower| hypocotyl| leaf| pod| root |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}. |