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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Gh_D13G1114 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
G2-like |
| Protein Properties |
Length: 350aa MW: 38855.8 Da PI: 8.1711 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D13G1114 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 107.2 | 8.9e-34 | 45 | 99 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprl+Wtp+LHerF+eav+qLGG++kAtPkt++++m+++gLtl+h+kSHLQkYRl
Gh_D13G1114 45 KPRLKWTPDLHERFIEAVNQLGGADKATPKTVMKIMGIPGLTLYHLKSHLQKYRL 99
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MYHHHHHQGK NIQACLRTAI PDRHLLLQGG NGTGDSGLVL STDAKPRLKW TPDLHERFIE 60
AVNQLGGADK ATPKTVMKIM GIPGLTLYHL KSHLQKYRLS KNPHGQANNG SNKIGAVAMP 120
ADKMSEANGI QMNNSTVGPQ TNRGLQIGEA LQMQIEVQRR LHEQLEVQRH LQFRIEAQGK 180
YLQSVLEKAQ EMSNQCLDST LMDLKELQGL CHQKTKTNSI DSCLTSIEGS QKDQEIHNNG 240
ICLRPYSLVA EDPWLPQTGL KENKMVPSST GKIADRSSNG SDLSITVGLQ GDKGKGFNSN 300
SSRFSERKFN GRNEEDGLHY FATKLDLNVD EENDVASRCK QFDLNGLSWG
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 3e-22 | 45 | 101 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 3e-22 | 45 | 101 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 3e-22 | 45 | 101 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 3e-22 | 45 | 101 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in phloem and/or cambium. {ECO:0000269|PubMed:15923329}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX587315 | 1e-76 | JX587315.1 Gossypium hirsutum clone NBRI_GE21375 microsatellite sequence. |
