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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Gh_D12G0701 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
LBD |
| Protein Properties |
Length: 232aa MW: 25431 Da PI: 8.2088 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D12G0701 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 99.4 | 3.4e-31 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
+C++C+vlr++C+++C+l+p++ p++q +++ +v+k+FG++ ++++++a+pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e
Gh_D12G0701 2 SCNGCRVLRKGCSESCILRPCLqwidsPEAQGHATIFVAKFFGRAGLMSFISAVPESQRSALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVE 99
6***********************************************************************************************99 PP
DUF260 94 lall 97
++l+
Gh_D12G0701 100 TVLR 103
8876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSESCILR PCLQWIDSPE AQGHATIFVA KFFGRAGLMS FISAVPESQR 60
SALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQAAVET VLREGTVRAV PELMAPSPAS 120
GEKSEATKIA CMLKLQETET KFNSTCRFST SRSKVSPKRI KVEEFSKFQP SDLDLCLTPS 180
STGNRLPDNR RPGTPSLNSE ESVTTTCFER GFADQQQQGG ETDRIKLLNL FV
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |
