 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Gh_D11G0473 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 206aa MW: 23987.2 Da PI: 8.6424 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D11G0473 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 63.6 | 2.8e-20 | 49 | 103 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
k++++++eq++ Le +F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+
Gh_D11G0473 49 KKRKLSQEQVDLLEHHFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKN 103
56699************************************************95 PP
|
| 2 | HD-ZIP_I/II | 119.4 | 1.9e-38 | 49 | 139 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
kkr+ls+eqv lLE++F +e+kLe+erK +la+eLgl+prqvavWFqnrRAR+k+k+lE+ +++Lk+ +d+++ e++rLe+ev++L+e+l
Gh_D11G0473 49 KKRKLSQEQVDLLEHHFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEGFSKLKSDHDEVVLEKCRLESEVTKLKEKLC 139
9**************************************************************************************9986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009733 | Biological Process | response to auxin |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MNKLEDQMAL ISQIYLGGYP QVAPQQAESK PRRRRNKNKG GENNLSMTKK RKLSQEQVDL 60
LEHHFGNEHK LESERKDRLA SELGLDPRQV AVWFQNRRAR WKNKKLEEGF SKLKSDHDEV 120
VLEKCRLESE VTKLKEKLCE AKKEIQRLGE RVDRGSSNSP SSSLTMEAMD TPFLGEFGLE 180
GYDNVFYIAE NSYNNIPGME WMNMYM
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 32 | 50 | RRRNKNKGGENNLSMTKKR |
| 2 | 32 | 51 | RRRNKNKGGENNLSMTKKRK |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, flowers and siliques. {ECO:0000269|PubMed:16055682}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA) and by salt stress. {ECO:0000269|PubMed:16055682}. |
