 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Gh_D07G2184 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 251aa MW: 28665.1 Da PI: 7.3618 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D07G2184 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 54.9 | 1.4e-17 | 67 | 119 | 5 | 57 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
+++ +q+++Le+ Fe +++ ++ +LAk lgL+ rq+ +WFqNrRa++k+
Gh_D07G2184 67 KRLNMDQVKALEKSFELRNKLEPGRKLQLAKDLGLKPRQIAIWFQNRRARWKN 119
56889**********************************************95 PP
|
| 2 | HD-ZIP_I/II | 121.2 | 5.3e-39 | 65 | 155 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92
+k+rl+ +qvk+LE+sFe ++kLep rK +la++Lgl+prq+a+WFqnrRAR+k+kqlEkdy+aLk+ y++ k++n++L++++++L+++l
Gh_D07G2184 65 NKKRLNMDQVKALEKSFELRNKLEPGRKLQLAKDLGLKPRQIAIWFQNRRARWKNKQLEKDYDALKKLYQTAKADNDALHAQNKKLTAQLL 155
79*************************************************************************************9985 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MAFPPHAFMF QTLHEDQNHF PSPYSLLPCP PQLFHGGVGK SHQEVHGHGD DDEYSDDDGS 60
HGGENKKRLN MDQVKALEKS FELRNKLEPG RKLQLAKDLG LKPRQIAIWF QNRRARWKNK 120
QLEKDYDALK KLYQTAKADN DALHAQNKKL TAQLLSLKAK DSNETRIKNE NEGSWCSNGS 180
ENNYDMNLAI RPAATMTQLL HGSSKPSLQC LKLDQVVQQD QSLACHMFNQ DGDEQQGFWP 240
WADQSIKFPL N
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 112 | 120 | RRARWKNKQ |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed predominantly in flowers, and in the cortex of the root and the stem. {ECO:0000269|PubMed:16055682}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
