PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D07G1934
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family SAP
Protein Properties Length: 444aa    MW: 49176.3 Da    PI: 6.4609
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D07G1934genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP6927e-21114441455
          SAP   1 mssssssss.seseegseggeggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwqrlt 97 
                  msss ssss se+ +g+    +g ++ g++++ps +r+ra ne+wp Pf+e l +qvaidasrs+Grla a alanvfqvcstw+avsrsd lw+rlt
  Gh_D07G1934   1 MSSSLSSSSsSEDANGN----SGRRGVGDFGAPSLTRRRANNEIWPGPFVEDLVVQVAIDASRSFGRLAVAAALANVFQVCSTWQAVSRSDPLWHRLT 94 
                  66664444404444443....334455799******************************************************************** PP

          SAP  98 rriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrdrlG 195
                    iW rt+ +++ Wreey+yrh+ta+nfr +r+ y tl+fdpa+vd+   +d l+Crcl+lsd++la+GfadG+vrlfdl+tr+ v tf+p+hrdr+G
  Gh_D07G1934  95 TVIWGRTHCMHASWREEYVYRHQTAQNFRAGRSFYHTLHFDPASVDN---PDGLTCRCLTLSDTHLACGFADGTVRLFDLSTRQLVGTFHPHHRDRFG 189
                  *******************************************8887...689********************************************* PP

          SAP 196 rfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavm 293
                  rfsravsGivi+d r++fatldGdihva+idg  +  ar+a+lG+vvndGalvdf+G+grWwvGlyaGvpGra+h+Wd++teel fv   ltdPeavm
  Gh_D07G1934 190 RFSRAVSGIVITDPRIIFATLDGDIHVAIIDG--EPLARTAHLGNVVNDGALVDFTGCGRWWVGLYAGVPGRALHVWDGNTEELAFVNTNLTDPEAVM 285
                  ********************************..6799************************************************************ PP

          SAP 294 GWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrgaqrgvlg 391
                  GWh+ltelte++Grvrvt++e+avaCtslr +v+dlrn++  l+++e rr l v+sld++ ea+++vdsrG a+vrrv++leevcrf+ r+   +v+g
  Gh_D07G1934 286 GWHTLTELTETIGRVRVTGQESAVACTSLRYMVVDLRNPEFPLHDREWRRRLTVASLDTNGEAFIMVDSRGLAIVRRVDTLEEVCRFNTRN--VNVMG 381
                  ******************************************************************************************5..59*** PP

          SAP 392 CvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfgaq 455
                  C+n+gyal++a+gv+rvWeie+ +  lysl++ v+evna+vaddrhva++ sd+ ihl+dfgaq
  Gh_D07G1934 382 CMNLGYALMCAAGVVRVWEIEHGQ-HLYSLNQNVEEVNAMVADDRHVAAAGSDTGIHLWDFGAQ 444
                  *********************976.9************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.502.1E-668143No hitNo description
SuperFamilySSF813831.72E-670117IPR001810F-box domain
SuperFamilySSF509983.92E-20143283IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene3DG3DSA:2.130.10.108.1E-9146270IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.101.9E-8304441IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509983.92E-20330442IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
PROSITE profilePS502949.731394444IPR017986WD40-repeat-containing domain
PROSITE patternPS006780427441IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MSSSLSSSSS SEDANGNSGR RGVGDFGAPS LTRRRANNEI WPGPFVEDLV VQVAIDASRS  60
FGRLAVAAAL ANVFQVCSTW QAVSRSDPLW HRLTTVIWGR THCMHASWRE EYVYRHQTAQ  120
NFRAGRSFYH TLHFDPASVD NPDGLTCRCL TLSDTHLACG FADGTVRLFD LSTRQLVGTF  180
HPHHRDRFGR FSRAVSGIVI TDPRIIFATL DGDIHVAIID GEPLARTAHL GNVVNDGALV  240
DFTGCGRWWV GLYAGVPGRA LHVWDGNTEE LAFVNTNLTD PEAVMGWHTL TELTETIGRV  300
RVTGQESAVA CTSLRYMVVD LRNPEFPLHD REWRRRLTVA SLDTNGEAFI MVDSRGLAIV  360
RRVDTLEEVC RFNTRNVNVM GCMNLGYALM CAAGVVRVWE IEHGQHLYSL NQNVEEVNAM  420
VADDRHVAAA GSDTGIHLWD FGAQ
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in inflorescence and floral meristems, young floral organ primordia, and later in ovule primordia.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016746127.10.0PREDICTED: transcriptional regulator STERILE APETALA-like
SwissprotQ9FKH10.0SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A1U8P4H80.0A0A1U8P4H8_GOSHI; transcriptional regulator STERILE APETALA-like
STRINGGorai.001G221400.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.10.0SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]