 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Gh_D07G0572 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
ERF |
| Protein Properties |
Length: 216aa MW: 24441.3 Da PI: 9.134 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D07G0572 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 50.6 | 4.7e-16 | 43 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y GVr+++ +grWvAeI+ s ++ r +lg+f+ +eeAa a+++a+ l+g
Gh_D07G0572 43 RYLGVRQRP-SGRWVAEIKNSS---QKLRLWLGTFDQPEEAALAYDNAAMVLRG 92
689******.7******98832...46**********************99998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MVPQQDQSPN KNQTSIEPHE AQTMAENSEK RSIKKVINNG RRRYLGVRQR PSGRWVAEIK 60
NSSQKLRLWL GTFDQPEEAA LAYDNAAMVL RGKNAKTNFQ YEGNLNLIGK VNINPRVYQL 120
LQLTIMKNHA RSALRSINGK RMDPVDIDGF DTIVEETIFC DDHHHHHDHD EGGNNNNNNK 180
LCKVSLGNSK VYSSVVVAPS FCSSSIDQQG QKENNM
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | JX616857 | 0.0 | JX616857.1 Gossypium hirsutum clone NBRI_GE61800 microsatellite sequence. |
