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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Gh_D07G0441 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
ERF |
| Protein Properties |
Length: 220aa MW: 24910.2 Da PI: 9.8975 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D07G0441 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 62.8 | 7.4e-20 | 77 | 127 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp + k r++lg+f ta eAaka+++a+ kl+g
Gh_D07G0441 77 HYRGVRRRP-WGKFAAEIRDP---NrKGSRIWLGTFETAIEAAKAYDRAAFKLRG 127
7********.**********9...6566*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MASFGEAPSD LELIKQHLFN DFPSMETFLS PPPTPQFHKQ STLSQRRPSI NVTIPPSKVN 60
ITSAATKAIE EHDEKRHYRG VRRRPWGKFA AEIRDPNRKG SRIWLGTFET AIEAAKAYDR 120
AAFKLRGSKA ILNFPLEIGN SNSTEFQPSN KRKREEEEEE RRKVVKKEEV TENVTTTGIC 180
LTPSNWKGFW DSEDMKGIFS IPPLSPLSPF GYSISGLAVM
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KR902546 | 0.0 | KR902546.1 Gossypium barbadense cultivar Pima90-53 transcription factor ERFb (ERFb) mRNA, complete cds. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Moore M,Vogel M,Dietz K
The acclimation response to high light is initiated within seconds as indicated by upregulation of AP2/ERF transcription factor network in Arabidopsis thaliana.
Plant Signal Behav, 2014. 9(10): p. 976479
[PMID:25482793] - Bolt S,Zuther E,Zintl S,Hincha DK,Schmülling T
ERF105 is a transcription factor gene of Arabidopsis thaliana required for freezing tolerance and cold acclimation.
Plant Cell Environ., 2017. 40(1): p. 108-120
[PMID:27723941] - König K,Vaseghi MJ,Dreyer A,Dietz KJ
The significance of glutathione and ascorbate in modulating the retrograde high light response in Arabidopsis thaliana leaves.
Physiol Plant, 2018. 162(3): p. 262-273
[PMID:28984358]
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