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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Gh_D06G2304 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
LBD |
| Protein Properties |
Length: 204aa MW: 21909.8 Da PI: 4.9851 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D06G2304 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 89.1 | 5.6e-28 | 2 | 104 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
+C++C+vlr++C++ Cvl+ + +++q +++ +++k+FG+s +l+l++++pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q++ e
Gh_D06G2304 2 SCNGCRVLRKGCSETCVLRSSLrwiesAEAQGNATLFLAKFFGRSDLLSLISSVPESQRPALFQSLLFEACGRTVNPVNGAVGLLSSGNWHICQAALE 99
6*********************9999777889***************************************************************999 PP
DUF260 94 lallk 98
++l++
Gh_D06G2304 100 TVLQG 104
88765 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSETCVLR SSLRWIESAE AQGNATLFLA KFFGRSDLLS LISSVPESQR 60
PALFQSLLFE ACGRTVNPVN GAVGLLSSGN WHICQAALET VLQGGALRPI SAGSWTPSCD 120
ESSDRFCVNS CNFESKPLTT TMMMTGNQSV LTAPSDLSLS VTAKLGGEMR TKTVSFYSEE 180
SEITTLGSNG NEETQDTKIL NLFV
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |
