 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Gh_D06G0175 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
WRKY |
| Protein Properties |
Length: 318aa MW: 34917.9 Da PI: 9.9266 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D06G0175 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.5 | 2e-31 | 244 | 302 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ edp+++++tYeg+Hnh+
Gh_D06G0175 244 HDDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERAVEDPRMLIVTYEGDHNHS 302
69*************************988****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MTVELMMGHG GVGGGGNSFT VKMEETALKE AANAGIQGFE ELIRLMSKSQ QLCSQDVCFN 60
APSSSEPAME IQAVTDKTVS SFKKVISLLG RPRIGHARFR RAPLNHLPQQ QQIQVSKDEE 120
VSTFKPLCST PSYKLPPLPT KSSHVLKTGV LERGNSVMSS LTGDTDSIQH QPCFSLGFQF 180
TNPSSHGKPP LSSKRKCNSM DDVANLKCGS SSSARCHCSK KRKSRVKRVI RVPAVSNKMA 240
DIPHDDYSWR KYGQKPIKGS PHPRGYYKCS SVRGCPARKH VERAVEDPRM LIVTYEGDHN 300
HSHNITTDVP SALVLESS
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HQ651068 | 0.0 | HQ651068.1 Gossypium hirsutum WRKY17 transcription factor mRNA, complete cds. |
