 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Gh_D05G2010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
LBD |
| Protein Properties |
Length: 234aa MW: 26073.5 Da PI: 8.4851 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D05G2010 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 90.3 | 2.4e-28 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
+C++C+vlr++C + Cvl+ + p++q +++ +++k+FG+s +l+l++++pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q++++
Gh_D05G2010 2 SCNGCRVLRKGCRETCVLRSSLrwiesPEAQGNATLFLAKFFGRSDLLSLISSVPESQRPALFQSLLFEACGRTVNPVNGAVGLLSSGNWHICQAAVD 99
6**********************************************************************************************999 PP
DUF260 94 lall 97
++l+
Gh_D05G2010 100 TVLR 103
8776 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 234 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCRETCVLR SSLRWIESPE AQGNATLFLA KFFGRSDLLS LISSVPESQR 60
PALFQSLLFE ACGRTVNPVN GAVGLLSSGN WHICQAAVDT VLRGGSLRPV SEISAGVWRP 120
SCDESSDRFC GDESYHFPSR YTESNPLMRM MMMDNQSASA ASDLSLSLTT TKSGNGRRAG 180
RRYEEEKKKA KTMSMYSEES EITASESNEY EGRQERKILK LFRSFLISRR SCSE
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |
