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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Gh_D05G1808 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
ERF |
| Protein Properties |
Length: 259aa MW: 28337.6 Da PI: 4.6751 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D05G1808 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 60.2 | 4.7e-19 | 40 | 89 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
ykGVr++ +g+WvAeIr+p + r +r +lg+f+t eAa a++aa++kl+g
Gh_D05G1808 40 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAAMAYDAAARKLYG 89
69****999.**********8...3.35************************987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 259 aa
Download sequence Send
to blast |
MSTSVMGGFG ERKQIRRPAQ ASSRKGCMRG KGGPENAICT YKGVRQRTWG KWVAEIREPN 60
RGARLWLGTF DTSHEAAMAY DAAARKLYGS EAKLNLPELC VGPRYPPPST NTQAAAMGNQ 120
PQNLNNSGTC SSNSPIIIRT NDVQPVYNND SVISFDSFPN ENIDSQGNPA ENNAKFGQNE 180
DGIDGFWENM CVNLPVLDES IWAEAAISLD FPVMDDPGSF ASSLVDVTGW DALQTPWCIL 240
YSYSNSHEYI MGFSGFVLA
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