PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_D04G0112
Common NameWRKY14
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family WRKY
Protein Properties Length: 303aa    MW: 34343.2 Da    PI: 5.5688
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_D04G0112genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.21.1e-25129190159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dg +WrKYGqK++ +s +prsY+rCt +   gC++ k+v+r ++dp++ eitY g+H+++
  Gh_D04G0112 129 MEDGQAWRKYGQKKILNSIHPRSYFRCTRKyeqGCRAMKQVQRMEDDPQMYEITYIGTHTCT 190
                  58**************************988889**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-25120190IPR003657WRKY domain
PROSITE profilePS5081120.174124187IPR003657WRKY domain
SuperFamilySSF1182901.57E-24126190IPR003657WRKY domain
SMARTSM007745.1E-35129191IPR003657WRKY domain
PfamPF031062.4E-24130189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MGTLSPWPET LSNSKKRVIQ QLVHGQECAT QLQILFHNPS EEGGRLSAEE VLVQNILTSF  60
NHTLSALSCI DSSEVSQNQT TCNDDSPWCE DRRSEGCSES SKRPGSKDKR GCYKRKRDAE  120
AWTVVSATME DGQAWRKYGQ KKILNSIHPR SYFRCTRKYE QGCRAMKQVQ RMEDDPQMYE  180
ITYIGTHTCT DLFRAPQIIP DSESWESQMG SHSQIPTKHH HLNPAAFPSV KQEAKEAAAS  240
DVTDMDCMVW KEIMGGGGGG FEYSSEHGMG CDYGDCRAFQ YEFLKPAEIE HDYHFDESEC  300
LIV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-26123189268OsWRKY45
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.178890.0ovule| root
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO738608150.0
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF0310750.0KF031075.1 Gossypium hirsutum WRKY transcription factor 14 (WRKY14) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001314260.10.0probable WRKY transcription factor 70
TrEMBLA0A059Q7930.0A0A059Q793_GOSHI; WRKY transcription factor 14
STRINGGorai.012G013900.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM40612757
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-47WRKY DNA-binding protein 70