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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Gh_D02G1724 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
HD-ZIP |
| Protein Properties |
Length: 268aa MW: 30450.8 Da PI: 4.5967 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_D02G1724 | genome | NAU-NBI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.5 | 4.6e-18 | 43 | 96 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
++++t++q+e Le+ Fe ++++ +++ +LAk+lgL+ rqV +WFqNrRa+ k+
Gh_D02G1724 43 KRRLTATQVEFLERSFEVENKLESDRKLRLAKELGLQPRQVAIWFQNRRARSKN 96
5689***********************************************995 PP
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| 2 | HD-ZIP_I/II | 120.9 | 6.5e-39 | 42 | 131 | 2 | 91 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
kkrrl++ qv++LE+sFe e+kLe++rK +la+eLglqprqva+WFqnrRAR k+kqlEkdy++L++++d+lk++ ++L ke+++L++++
Gh_D02G1724 42 KKRRLTATQVEFLERSFEVENKLESDRKLRLAKELGLQPRQVAIWFQNRRARSKNKQLEKDYDSLRATFDKLKADFDNLLKEKDDLKNQV 131
9**************************************************************************************997 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MEPLWTPSST SSVLQGEKPV MEYEYVNGGD DLDGSCQPAG VKKRRLTATQ VEFLERSFEV 60
ENKLESDRKL RLAKELGLQP RQVAIWFQNR RARSKNKQLE KDYDSLRATF DKLKADFDNL 120
LKEKDDLKNQ VLALKEKLLI KEKGMENLGS VEAIHSSNDE PQKPNPDASH VPLLACKQEE 180
ACSAKSDVFD SDSPHYTDGH GYHSSFIEPT DSSNVFEPDQ SDEEDDLSKS LLHPPLFFPK 240
FDCYYDAPAT SCNFSLPVED QSFWSSLY
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