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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Gh_A13G1254 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
ERF |
| Protein Properties |
Length: 166aa MW: 18112.2 Da PI: 9.1984 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A13G1254 | genome | NAU-NBI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 66 | 7.4e-21 | 20 | 70 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+y+GVr ++ +gr++AeIrdp+ r +r++lg+f+tae+Aa+a++aa+++l+g+
Gh_A13G1254 20 RYRGVRKRP-WGRYAAEIRDPK----RkTRVWLGTFDTAEDAARAYDAAARELRGA 70
59*******.**********83....45**************************95 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 166 aa
Download sequence Send
to blast |
MAPRSKPINP NSNLVSMEIR YRGVRKRPWG RYAAEIRDPK RKTRVWLGTF DTAEDAARAY 60
DAAARELRGA KAKTNFADSN FTRSPSHSST VESSSPPPPL DLTLAVTANR PQFFFDAFAS 120
AGSGCPLSCG AQSDTDSSSW VVDLEGGGGQ VREFDLDLNK LPAEMK
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| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways, and could also regulate other AtERFs. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:9756931}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by jasmonate (JA) and by Alternaria brassicicola (locally and systemically), but only slightly by ethylene. Strong induction by wounding, cold or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by exogenous abscisic acid (ABA), and heat stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Cao WH, et al.
Modulation of ethylene responses affects plant salt-stress responses.
Plant Physiol., 2007. 143(2): p. 707-19
[PMID:17189334] - Lyons R, et al.
The RNA-binding protein FPA regulates flg22-triggered defense responses and transcription factor activity by alternative polyadenylation.
Sci Rep, 2013. 3: p. 2866
[PMID:24104185] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Gao S, et al.
A cotton miRNA is involved in regulation of plant response to salt stress.
Sci Rep, 2016. 6: p. 19736
[PMID:26813144] - Zhou X, et al.
The ERF11 Transcription Factor Promotes Internode Elongation by Activating Gibberellin Biosynthesis and Signaling.
Plant Physiol., 2016. 171(4): p. 2760-70
[PMID:27255484] - Liu W, et al.
The ethylene response factor AtERF4 negatively regulates the iron deficiency response in Arabidopsis thaliana.
PLoS ONE, 2017. 12(10): p. e0186580
[PMID:29045490]
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