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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Gh_A12G0552 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
WOX |
| Protein Properties |
Length: 278aa MW: 31044.1 Da PI: 6.6598 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A12G0552 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.2 | 1.6e-19 | 32 | 92 | 3 | 57 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
R+t+t++q+++L++l+++ r ps++++++++++l +++ ++V++WFqN++a+e++
Gh_A12G0552 32 ARWTPTTDQIRILKDLYNNngVRSPSTDQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 92
7*****************8678*************************************97 PP
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| 2 | Wus_type_Homeobox | 113.7 | 9.2e-37 | 30 | 94 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+++RWtPt++Qi+iL++ly+ +G+r+P++++iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
Gh_A12G0552 30 SSARWTPTTDQIRILKDLYNnNGVRSPSTDQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 94
689****************989*****************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MEPQQQQNQQ APNEDCGGGS GKGSFLCRQS SARWTPTTDQ IRILKDLYNN NGVRSPSTDQ 60
IQRISARLRQ YGKIEGKNVF YWFQNHKARE RQKKRFTTTT NHQVPMQSPT TAANNKYPNI 120
SPGCYSPTSL SSTGALTVGQ IGNYGYGSIT MEKSFRDCSI SACGGSTSVG ESLSHNFGWV 180
GFDPTYSSSY TFFEHKKFME ERQKDEDDAE EEAAAPQIET LPLFPMHSED DNGFCSNIKP 240
RLDSCYSGWY KSEDGYTGSR ASLELSLNPY AGRSQDSI
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: In the active shoot meristem, it is specifically expressed in a small cell group underneath the presume position of stem cells. {ECO:0000269|PubMed:12208843}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that plays a central role during developmental processes such as early embryogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). Acts in parallel with HAM. {ECO:0000269|PubMed:12208843}. |
