PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A11G2598
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family BES1
Protein Properties Length: 317aa    MW: 34097.1 Da    PI: 8.2219
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A11G2598genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822203.65.8e-6321191118
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  ++++r+ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kple+++++g sa+asp+ss++ s+
  Gh_A11G2598   2 TSGTRMPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSATASPSSSYHPSP 99 
                  5899*******************************************************************************************999 PP

       DUF822  99 kssalaspvesysaspksss 118
                   ss+++sp++s+  + ++ +
  Gh_A11G2598 100 MSSSFPSPASSSYVVNSNGD 119
                  99999999887766555433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.2E-583131IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MTSGTRMPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPLERM DIVGGSATAS PSSSYHPSPM SSSFPSPASS SYVVNSNGDG  120
SSLIPWLKNL SSASSSPMSS KLPHIYIHSG SISAPVTPPL SSPTARTPRT NTDWEDLTAR  180
PGWSAQQHSF LPSSTPPSPG RQIVPDPEWF AGLRIPLSGP TSPTFSLVSS NPFGFKEEVL  240
AGGGSRMWTP GQSGTCSPAI AAGSDHTADV PMSEVISDEF AFGSNATGLV KPWEGERIHE  300
DCGSDDLELT LGSSRIR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A9e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B9e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C9e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D9e-24677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ghi.200030.0boll| ovule
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012434546.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-135BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A0B0P4830.0A0A0B0P483_GOSAR; BES1/BZR1 4-like protein
STRINGGorai.007G327000.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19172781
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-118BES1/BZR1 homolog 4