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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Gh_A11G0562 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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| Family |
LBD |
| Protein Properties |
Length: 226aa MW: 25278.7 Da PI: 8.2744 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A11G0562 | genome | NAU-NBI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 105.6 | 4.2e-33 | 22 | 117 | 1 | 95 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
aCaaCk++r+kC ++C+lapyfpa++ ++f++vhk+FG+sn +k+++++ ++e+r+++++sl++eA ++++dPv G +g ++k+ ++l+ k++ +
Gh_A11G0562 22 ACAACKHQRKKCDENCILAPYFPADKCREFQAVHKVFGVSNATKIVRNAnSDEDRKKVADSLIWEAFCWQKDPVLGPYGDYRKIYEELSLYKKQSQ 117
7**********************************************9945566*******************************99998887765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MQRETSNGVA AAAAAASRVH PACAACKHQR KKCDENCILA PYFPADKCRE FQAVHKVFGV 60
SNATKIVRNA NSDEDRKKVA DSLIWEAFCW QKDPVLGPYG DYRKIYEELS LYKKQSQMML 120
LQDHDHQPTH PVFKMGPAHA VTPTKRLIDV KGAISDGTLR CYNPDVDVNS LVGFSGYPYP 180
SQSEKPVQEK AIHNTTTIVP LQYYASADVG FMNGKTLEST RWDNIL
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