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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Gh_A11G0447 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
LBD |
| Protein Properties |
Length: 224aa MW: 24222.7 Da PI: 8.4291 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A11G0447 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 94.9 | 8.7e-30 | 2 | 103 | 1 | 97 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93
+C++C+vlr++C+++C+l+ ++ p++q ++ +v+k+FG++ ++++++a+pe +r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+++e
Gh_A11G0447 2 SCNGCRVLRKGCSDSCILRSCLqwidnPESQGFATLFVAKFFGRAGLMSFISAVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWAGNWHVCQAAVE 99
6*************************99********************************************************************99 PP
DUF260 94 lall 97
++l+
Gh_A11G0447 100 TVLR 103
9876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 224 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCSDSCILR SCLQWIDNPE SQGFATLFVA KFFGRAGLMS FISAVPEPQR 60
PALFQSLLFE ACGRTVNPVN GAVGLLWAGN WHVCQAAVET VLRGGTLRPI PELHAPTESN 120
EASEAAGTAD MWKLQETATS LNSNCRFSTS RSKVSSHKRR TIGELKKLQP SDLDLCLTPS 180
FKGNRVLDNR RPGTPSMISD ESVTTATCTE SGLAGQGKLL NLFV
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |
