 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Gh_A07G1912 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
WRKY |
| Protein Properties |
Length: 331aa MW: 36937.9 Da PI: 9.948 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A07G1912 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 96.5 | 1.9e-30 | 266 | 324 | 3 | 60 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhek 60
D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ e+p ++++tYe+eHnh+k
Gh_A07G1912 266 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPAMLIVTYESEHNHPK 324
99***********************9988****************************85 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MEEVEEANKA AVQSCHRVLS LLSQPQDQVH YRNLMAETGE AVFKFKRVVS LLNSSLGHAR 60
VRKLRKLQTP FPQSIFLDNQ LHNPTDYPSK DLQLGYPQEL SSHAKSSLYL GTPCLELSSN 120
GKNPLPLAQQ PPPPAHYHFL HQQRLQLQQH QAEMLSRKSN SGINFNFDSS SCTPTMSSTR 180
SFISSLSIDG SVANMDSGNA FHLIGAPRSS DQVSQHKKKC SGKGEDGSVK CGSSGKCHCS 240
KRRKHRVKRS IKVPAISNKL ADIPPDDYSW RKYGQKPIKG SPHPRGYYKC SSMRGCPARK 300
HVERCLEEPA MLIVTYESEH NHPKLPSQAT T
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KF669800 | 0.0 | KF669800.1 Gossypium hirsutum WRKY transcription factor 111 (WRKY111) mRNA, complete cds. |
