PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Gh_A07G1730
Organism
Gossypium hirsutum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family SAP
Protein Properties Length: 453aa    MW: 50119.1 Da    PI: 6.3595
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Gh_A07G1730genomeNAU-NBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP702.64.3e-21414531455
          SAP   1 mssssssssseseegseggeggdass....gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrsdllwq 94 
                  msssssssss+s+++s+++ + ++s+    g++++ps +r+ra ne+wp Pf+e l +qvaidasrs+Grla a alanvfqvcstw+avsrsd lw+
  Gh_A07G1730   1 MSSSSSSSSSSSSSSSSSEDANGNSGrrgvGDFGAPSLTRRRANNEIWPGPFVEDLVVQVAIDASRSFGRLAVAAALANVFQVCSTWQAVSRSDPLWH 98 
                  6777666666666655555555544456679******************************************************************* PP

          SAP  95 rltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlhvstflpqhrd 192
                  rlt  iW rt+ +++ Wreey+yrh+ta+nfr +r+ y tl+fdpa+vd+   +d l+Crcl+lsd++la+GfadG+vrlfdl+tr+ v tf+p+hrd
  Gh_A07G1730  99 RLTTVIWGRTHCMHASWREEYVYRHQTAQNFRAGRSFYHTLHFDPASVDN---PDGLTCRCLTLSDTHLACGFADGTVRLFDLSTRQLVGTFYPHHRD 193
                  **********************************************8887...689****************************************** PP

          SAP 193 rlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPe 290
                  rlGrfsravsGivi+d r++fatldGdihva+idg  +  ar+a+lG+vvndGalvdf+G+grWwvGlyaGvpGra+h+Wd++teel +v   ltdPe
  Gh_A07G1730 194 RLGRFSRAVSGIVITDPRIIFATLDGDIHVAIIDG--EPLARTAHLGNVVNDGALVDFTGCGRWWVGLYAGVPGRALHVWDGNTEELAYVNTNLTDPE 289
                  ***********************************..6799********************************************************* PP

          SAP 291 avmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrvrgaqrg 388
                  av+GW++ltel+e++Grvrvt++e+avaCtslr +v+dlrn++  l+++e rrGl v+sld+++ea+++vd+rG a+vrrv++leevcrf+ r+ + +
  Gh_A07G1730 290 AVRGWYTLTELIETIGRVRVTGQESAVACTSLRYMVVDLRNPEFPLHDREWRRGLTVTSLDTNSEAFIMVDNRGLAIVRRVDTLEEVCRFNTRQGNVN 387
                  **********************************************************************************************99** PP

          SAP 389 vlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsssdgtihlldfgaq 455
                  v+gC+n+gyal++a+gv+rvWeie+ +  lysl++ v+evna+vaddrhva++ sd+ ihl+dfgaq
  Gh_A07G1730 388 VMGCMNLGYALMCAAGVVRVWEIEHGQ-HLYSLNQNVEEVNAMVADDRHVAAAGSDSWIHLWDFGAQ 453
                  ************************976.9************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.502.2E-675150No hitNo description
SuperFamilySSF813831.02E-676136IPR001810F-box domain
SMARTSM003209132177IPR001680WD40 repeat
SuperFamilySSF509983.84E-19149290IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene3DG3DSA:2.130.10.101.5E-8153277IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.104.5E-9323450IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509983.84E-19337451IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
SMARTSM00320330372409IPR001680WD40 repeat
PROSITE profilePS502949.678403453IPR017986WD40-repeat-containing domain
SMARTSM003203.3412449IPR001680WD40 repeat
PROSITE patternPS006780436450IPR019775WD40 repeat, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MSSSSSSSSS SSSSSSSSED ANGNSGRRGV GDFGAPSLTR RRANNEIWPG PFVEDLVVQV  60
AIDASRSFGR LAVAAALANV FQVCSTWQAV SRSDPLWHRL TTVIWGRTHC MHASWREEYV  120
YRHQTAQNFR AGRSFYHTLH FDPASVDNPD GLTCRCLTLS DTHLACGFAD GTVRLFDLST  180
RQLVGTFYPH HRDRLGRFSR AVSGIVITDP RIIFATLDGD IHVAIIDGEP LARTAHLGNV  240
VNDGALVDFT GCGRWWVGLY AGVPGRALHV WDGNTEELAY VNTNLTDPEA VRGWYTLTEL  300
IETIGRVRVT GQESAVACTS LRYMVVDLRN PEFPLHDREW RRGLTVTSLD TNSEAFIMVD  360
NRGLAIVRRV DTLEEVCRFN TRQGNVNVMG CMNLGYALMC AAGVVRVWEI EHGQHLYSLN  420
QNVEEVNAMV ADDRHVAAAG SDSWIHLWDF GAQ
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in inflorescence and floral meristems, young floral organ primordia, and later in ovule primordia.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016670333.10.0PREDICTED: transcriptional regulator STERILE APETALA-like
SwissprotQ9FKH11e-179SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A1U8I2930.0A0A1U8I293_GOSHI; transcriptional regulator STERILE APETALA-like
STRINGGorai.001G221400.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.10.0SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]