|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Gh_A07G0717 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
Family |
GRAS |
Protein Properties |
Length: 548aa MW: 60101 Da PI: 4.7198 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gh_A07G0717 | genome | NAU-NBI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 457.9 | 6.1e-140 | 171 | 533 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
lv++L++cAeav++++l+la+al++++ las++ +m+++a+yf+eALa+r++r ++pp + ++ + ++ + f+e++P+lkf+h+ta
Gh_A07G0717 171 LVHTLMACAEAVQQDNLKLADALVKHIGLLASSQTGAMRKVATYFAEALARRIYR-------IFPPDSLDP-SYNDK--LQMHFYETCPYLKFAHFTA 258
689***************************************************9.......566666653.23344..3446*************** PP
GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
NqaIlea++ ++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++g++fef+ +va++l+dle+e+L++
Gh_A07G0717 259 NQAILEAFSMANRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDDTDALQQVGWKLAELAERIGIEFEFRGFVANSLADLEPEMLDI 356
************************************************************************************************** PP
GRAS 197 kp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
+p E++aVn v++lh ll++++ +e+ v++ +k ++Pk+v+vveqea+hn++ Fl+rf+eal+yys+lfdsle + + +++ +++ +lgr
Gh_A07G0717 357 RPpeIEVVAVNAVFELHPLLARPGGIEK----VVSSIKAMKPKIVTVVEQEANHNGPVFLDRFTEALHYYSTLFDSLEGSGVAPPSQDLAMSELYLGR 450
**9899*********************9....*********************************************777666667889999999*** PP
GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+i+nvvaceg +r+erhe l +Wr r+e+aGF+pv+l+++a+kqa++ll+ ++ +dgyrvee++g+l+lgW++rpL+++SaWr
Gh_A07G0717 451 QICNVVACEGMDRVERHEPLTQWRTRMETAGFSPVHLGSNAYKQASMLLALFAsGDGYRVEENNGCLMLGWHTRPLIATSAWR 533
**********************************************************************************8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 548 aa
Download sequence Send
to blast |
MKRDHQEISG SGSNPAESSS IKGKLWEEDP DAGGMDDELL AVLGYKVRSS DMADVAQKLE 60 MLEKVMGTAQ EDGISQLGDT VHFNPSDLSG WVQNLLIEFN GSTTTPDPNF NDDSEYDLRA 120 IPGVAAYPPV KSDPGLENTR KRAKTESSSS SSSTTTRPVV LIDSQETGVR LVHTLMACAE 180 AVQQDNLKLA DALVKHIGLL ASSQTGAMRK VATYFAEALA RRIYRIFPPD SLDPSYNDKL 240 QMHFYETCPY LKFAHFTANQ AILEAFSMAN RVHVIDFGLK QGMQWPALMQ ALALRPGGPP 300 AFRLTGIGPP QPDDTDALQQ VGWKLAELAE RIGIEFEFRG FVANSLADLE PEMLDIRPPE 360 IEVVAVNAVF ELHPLLARPG GIEKVVSSIK AMKPKIVTVV EQEANHNGPV FLDRFTEALH 420 YYSTLFDSLE GSGVAPPSQD LAMSELYLGR QICNVVACEG MDRVERHEPL TQWRTRMETA 480 GFSPVHLGSN AYKQASMLLA LFASGDGYRV EENNGCLMLG WHTRPLIATS AWRLAGTESG 540 SELTQELS
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | DQ006269 | 0.0 | DQ006269.1 Gossypium hirsutum GIA/RGA-like gibberellin response modulator (GAI) gene, complete cds. |