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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Gh_A07G0585 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 312aa MW: 35602.5 Da PI: 4.6647 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A07G0585 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 61.8 | 1e-19 | 96 | 149 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t +q++ Le+ Fe ++++ e++++LAk+lgL+ rqV +WFqNrRa++k
Gh_A07G0585 96 KKRRLTVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARWK 149
56689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 127.7 | 5.1e-41 | 95 | 185 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekkrrl+ +qv++LE+sFe e+kLeperK++la+eLglqprqva+WFqnrRAR+ktkqlEkdy++L++++++lk++ +L ke+++L++e+
Gh_A07G0585 95 EKKRRLTVDQVQFLEKSFEVENKLEPERKTQLAKELGLQPRQVAIWFQNRRARWKTKQLEKDYDTLQASFNTLKADYGNLLKEKDKLKQEV 185
69**************************************************************************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MAGGRVVSCN NTNSVGGSSN LSVLLQNQRV PSSSEPMDPL FIPRPGSSPY SFFVSGTRSM 60
VSFEDVHGGN RSFFRSFDEE ENGDEDLDEY FHQPEKKRRL TVDQVQFLEK SFEVENKLEP 120
ERKTQLAKEL GLQPRQVAIW FQNRRARWKT KQLEKDYDTL QASFNTLKAD YGNLLKEKDK 180
LKQEVLSFES LIEFKPLYGF CLILILVYQV LQLTDKLVMK EKNNSELSDV NTVCQEPPQK 240
PVDSDSPHSS YPFETDQSDT SQDEEDSLSK ALFQPSSHIF PKLEGNDYSD PPASSCSYGF 300
HAEDHAFWSS AY
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 143 | 151 | RRARWKTKQ |
