 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Gh_A06G1941 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
LBD |
| Protein Properties |
Length: 204aa MW: 22269.5 Da PI: 6.7133 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A06G1941 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 134.5 | 4.1e-42 | 51 | 150 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98
+CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l+a+la+++
Gh_A06G1941 51 PCAACKILRRRCVEKCVLAPYFPPTEPYKFTIAHRVFGASNIIKSLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQ 148
7***********************************************************************************************99 PP
DUF260 99 ee 100
+e
Gh_A06G1941 149 AE 150
87 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 204 aa
Download sequence Send
to blast |
MEHNEKCAQS QSCSSSPRFP SPNSQSPPPP PPAPASPSLP PPPTPTVVLS PCAACKILRR 60
RCVEKCVLAP YFPPTEPYKF TIAHRVFGAS NIIKSLQELP ESQRADAVSS MVYEASARIR 120
DPVYGCAGAI CQLQKQVSEL QAQLAKAQAE IVTMQCQQAN LLAIILEMSQ SKEASISQHQ 180
PYNMDTTCFL DDNNLGSAWE PLWT
|
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in young shoots, roots, stems, leaves and flowers. {ECO:0000269|PubMed:12068116}. |
