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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gh_A05G2046 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
GRAS |
Protein Properties |
Length: 554aa MW: 61866.1 Da PI: 4.8539 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gh_A05G2046 | genome | NAU-NBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 445.1 | 4.8e-136 | 186 | 554 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
+ L+ecA ++++g+ e a+a++++l++l+s +gdp qR+aay++e+Laar+a s++ lykal+++e + ss++laa+++++ev+P++kf++++aN
Gh_A05G2046 186 QMLIECAAVLAEGNIEGASAIINELRQLVSVHGDPPQRIAAYMVEGLAARVAASGKYLYKALRCKEPP---SSDRLAAMQILFEVCPCFKFGFMAANG 280
79*****************************************************************9...9************************** PP
GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
aI ea++ e+rvHiiDfdi+qG Q+++L+q++a+ p++pp+lR+Tgv++p+s + le +g rL+k+Ae lgv+fef++ va+r++ +++++L++
Gh_A05G2046 281 AIIEAFKDEKRVHIIDFDINQGSQYITLIQSIAKLPGKPPHLRLTGVDDPDSAqrLNGGLEIIGLRLEKLAEVLGVSFEFQA-VASRTSIVTPSMLDC 377
**************************************************999777889***********************.7************** PP
GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
+pgEal+Vn+++qlh+++desvs+ ++rd++L++vksl+Pk+v+vveq++++n+++F+ rf+ea +yys++f+sl+++lpres++r++vEr++l+r+i
Gh_A05G2046 378 RPGEALVVNFAFQLHHMPDESVSTINQRDQLLRMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYSYYSTVFESLDVTLPRESQDRMNVERQCLARDI 475
************************************************************************************************** PP
GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
vn+vaceg+er+er e ++kWr+r+++aGF++ p++ ++ + ++ l+r++ ++ y+++e+ g+l +gW++++L+++SaWr
Gh_A05G2046 476 VNIVACEGEERIERYEVAGKWRARMTMAGFTSCPMTPNVIDMIRKLIREYCDR-YKLKEDLGALHFGWEGKSLIVASAWR 554
***************************************************66.*************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 554 aa
Download sequence Send
to blast |
MSLVTSTEPA ITACRNTKLY SIQGSGDSSG LSTQMFGSDK HKPRCITDSY SCESYEKSFV 60 GSPSEELMHP SRSDVAESSI RQQNVSSYQP RDYLEVQSAD TLDHDTDKMK LMLQELERDL 120 LGDNDVDVGD MFGTDLNMEI DDEWSDPVRT EPIHESPKES SSSESNLSSI SSNKEASHFS 180 SRTPKQMLIE CAAVLAEGNI EGASAIINEL RQLVSVHGDP PQRIAAYMVE GLAARVAASG 240 KYLYKALRCK EPPSSDRLAA MQILFEVCPC FKFGFMAANG AIIEAFKDEK RVHIIDFDIN 300 QGSQYITLIQ SIAKLPGKPP HLRLTGVDDP DSAQRLNGGL EIIGLRLEKL AEVLGVSFEF 360 QAVASRTSIV TPSMLDCRPG EALVVNFAFQ LHHMPDESVS TINQRDQLLR MVKSLNPKLV 420 TVVEQDVNTN TSPFFPRFIE AYSYYSTVFE SLDVTLPRES QDRMNVERQC LARDIVNIVA 480 CEGEERIERY EVAGKWRARM TMAGFTSCPM TPNVIDMIRK LIREYCDRYK LKEDLGALHF 540 GWEGKSLIVA SAWR
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, shoots, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |