![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Gh_A05G0718 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
C2H2 |
Protein Properties |
Length: 399aa MW: 44014.8 Da PI: 8.1784 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Gh_A05G0718 | genome | NAU-NBI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Ghi&pid=Gh_A05G0718) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 22.3 | 3.4e-07 | 236 | 258 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
+ C+ Cgk F+r nL+ H+r H
Gh_A05G0718 236 HYCQVCGKGFKRDANLRMHMRAH 258
68*******************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MISGSASCFP SASQGLPMYP LAEENMVPSS LEAGSGSGPD QSHSTTLLYN LSILKDKVHE 60 AQSLVSILIS PDQAHPESTS LAVSSMGSLV QDIIVTASSM IFICQQMSLG TASGNNINTE 120 LHQQYVRVIP DNRISQPPNF SDICVGNIVQ EKGQSFYSSA ETISWYGDTC NNGRNNTNGN 180 NRNRSLQVSN DDKLERKEFV EFPRRSEISG GCEAVPAMNY DIIELDAEDL LAKYTHYCQV 240 CGKGFKRDAN LRMHMRAHGD EYKSSAALIN PMKNPREGSS SSSALGNCST KMNKKYSCPQ 300 EGCRWNQKHA KFQPLKSMIC VKNHYKRSHC PKMYVCKRCN CKQFSVLSDL RTHEKHCGDL 360 KWQCSCGTTF SRKDKLMGHV ALFVGHTPAL ATNPMANPG
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed at low levels in roots (e.g. root tips and lateral roots), leaves (e.g. at the edge of mature leaves, possibly in hydathodes, and in vascular bundles), flowers (e.g. floral filaments), stems, siliques and cotyledons. {ECO:0000269|PubMed:23935008}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. Together with STOP1, plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation. {ECO:0000269|PubMed:23935008}. |