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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Gh_A04G1130 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
B3 |
| Protein Properties |
Length: 149aa MW: 17438.1 Da PI: 10.0881 |
| Description |
B3 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Gh_A04G1130 | genome | NAU-NBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | B3 | 33.5 | 7.2e-11 | 8 | 95 | 1 | 88 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrs 88
f+k lt+ dv k+ l++p + ++ gk+ + +++d++g+ W+++++ rkk+ v t+GW Fv+ +L +gD v +++ ++
Gh_A04G1130 8 FKKRLTKTDVEKR--LSIPSRKK-KCflnfRGKH--MAEFKVKDKHGKDWTFNCSTRKKDYPkPVVTSGWLLFVQWWNLAVGDEVKVYRKMDE 95
7888988888876..9***9985.5568775554..34899*************7655544369*******************9998866444 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 149 aa
Download sequence Send
to blast |
MAIEKELFKK RLTKTDVEKR LSIPSRKKKC FLNFRGKHMA EFKVKDKHGK DWTFNCSTRK 60
KDYPKPVVTS GWLLFVQWWN LAVGDEVKVY RKMDEAGEEH YRIEVAVATN STADGTVNDD 120
QTEKLHNQPF FEFISQKPDL NIGKSKLIN
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 8 | 28 | KKRLTKTDVEKRLSIPSRKKK |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC243083 | 0.0 | AC243083.1 Gossypioides kirkii clone GKH003A06-jng, complete sequence. |
