|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GSVIVT01034189001 |
Common Name | VIT_08s0007g00180 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
|
Family |
Dof |
Protein Properties |
Length: 324aa MW: 34464.6 Da PI: 9.2277 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSVIVT01034189001 | genome | Genoscope | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 124.6 | 3.2e-39 | 69 | 128 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
GSVIVT01034189001 69 EAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 128
6789*****************************************************975 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009640 | Biological Process | photomorphogenesis |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MVFSSMPSYL DPANWQQPHN HEAGSSGLPN QPPPPPPPPP QPHGGGGTGS IRPGSMADRA 60 RLANIPLPEA ALKCPRCEST NTKFCYFNNY SLSQPRHFCK TCRRYWTRGG ALRNVPVGGG 120 CRRNKRSKGS SSKSPVSGDR QAGSSSTGAI HSNCSTAEIL GLAPQIPPMR FMAPLHHLAD 180 YGAGDIGLNY SGIPTAVGGT GDMNFQIGSL EQWRLQQTQQ FPFLGGLDPP PGLYPLEGGV 240 EPSNYVGGSS QVRPKLTGSG LSQVASVKME DNHEMNVARQ FLGIPGNDQY WGGNAWTDLA 300 SFSSSSTTET SGVGRNRKLQ LTM*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AM455824 | 0.0 | AM455824.2 Vitis vinifera contig VV78X138031.14, whole genome shotgun sequence. |
Orthologous Group
? help Back to Top |
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP38 | 17 | 445 |