 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GSVIVT01033188001 |
Common Name | LOC100254807, VIT_04s0069g00920 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
|
Family |
WRKY |
Protein Properties |
Length: 268aa MW: 29280.1 Da PI: 9.8064 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSVIVT01033188001 | genome | Genoscope | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101 | 7e-32 | 189 | 247 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+++dp ++++tYegeH h+
GSVIVT01033188001 189 ADEYSWRKYGQKPIKGSPYPRGYYKCSSMrGCPARKHVERASDDPAMLIVTYEGEHSHS 247
69************************9988****************************8 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:1990841 | Molecular Function | promoter-specific chromatin binding |
Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MAVELLGFSK MDEQIAIQDA ASAGLKSMEH LIRMLSHQTN QNHNMNQLDC REITDYTVSK 60 FKKVISILNR TGHARFRRGP VSSSDSPSSD PMSSATNSSF MSSITGDGSV SNGKQGSSLF 120 LAPAPAVSAG KPPLSSSCRK RCHEHDHSDD ISGKYSSSGR CHCSKRRRSR VKKTIRVPAI 180 SSKIADIPAD EYSWRKYGQK PIKGSPYPRG YYKCSSMRGC PARKHVERAS DDPAMLIVTY 240 EGEHSHSQVA MQEMIPHGGV GLVFEST*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Function -- GeneRIF ? help
Back to Top |
- VvWRKY11 gene encodes for a transcriptional factor that is involved in dehydration stress response. [VvWRKY11]
[PMID: 20354906]
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AM886167 | 0.0 | AM886167.1 Vitis thunbergii mRNA for DNA-binding protein (wrky11 gene). |