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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSVIVT01031762001 |
Common Name | VIT_03s0063g00630 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
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Family |
B3 |
Protein Properties |
Length: 364aa MW: 40986.9 Da PI: 7.6183 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSVIVT01031762001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 51.4 | 2e-16 | 43 | 132 | 2 | 99 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93
+k ++ps+v+ +l lpkkf++ h +k ++t++l d++g +++ k+ + k++ l++GW++F a++L egD++vF l++ ++f +
GSVIVT01031762001 43 IKSMLPSHVTGGFWLGLPKKFCDVHL-PK-YDTTIILVDKRGAEYKTKFLVGKTG----LSGGWRGFSIAHNLLEGDVLVFGLVQPTKF--M 126
6899******************8883.33.5579***************544444....************************987777..9 PP
EEEE-S CS
B3 94 vkvfrk 99
v ++r+
GSVIVT01031762001 127 VYIVRT 132
999886 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MSSCKRIRVD TDHITNGNEA KSSVMERAEK VQRNLPSEIP SMIKSMLPSH VTGGFWLGLP 60 KKFCDVHLPK YDTTIILVDK RGAEYKTKFL VGKTGLSGGW RGFSIAHNLL EGDVLVFGLV 120 QPTKFMVYIV RTNGFDEFYI PQENTKKESL SVSTTELGLA ACQSENDSDG HGSEVLERIR 180 FSESAVDFKE VKSMEAFSIL VNGLIINSEF SKHLQTKYYE LCCSQKTYLH DHLLDGLNYK 240 LAAGIISETV NIADAIRASK LTTSRDNFSI WSKTLKAFQE LGMNVGFLRA RLDQLMSFGF 300 VENRKREARL ERVSAEEKIR DLEGSLLHVK EVRKRLNAEI EALDSPAAEK HEMMFQELAK 360 SSW*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AM445855 | 0.0 | AM445855.2 Vitis vinifera contig VV78X102978.13, whole genome shotgun sequence. |