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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSVIVT01030278001 |
Common Name | VIT_08s0058g00520 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
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Family |
ERF |
Protein Properties |
Length: 366aa MW: 40694.9 Da PI: 4.0658 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSVIVT01030278001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 29.1 | 2.5e-09 | 9 | 38 | 25 | 55 |
AP2 25 ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
+g r+r +lg+f taeeAa+a+++a+++++g
GSVIVT01030278001 9 RG-RRRLWLGSFSTAEEAARAYDEAARAMYG 38
44.6************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MGSCGKKSRG RRRLWLGSFS TAEEAARAYD EAARAMYGSS ARLNFPEDSQ QSVEFSQDST 60 STTTSTSPPK SIERPNKFGT SFAEESSVEP ECPVVCPKDN NSTPSDEVEV ETPMDEENCE 120 NATDTGGCYG SGNELEYFQN LLTQETYDFG QLPIVTSPSN DVEFKTPIIW QANNEELEES 180 PENSDHHGFN KGFWDLLLGG PSDIEPLNLI GTDNPALEQS GKYNFGDFSF TTMSWTGYEV 240 ETPGMKEEKK EQLEGITDYS GHHGFYDKHS HFRAFEETIN SKGSEAINTD KSWTQEGNYD 300 DDQLLLPLEG HMQFGRPSDC CPQSQNPDAQ PLRELHHIGE TDASVDYKLD SLEPESSLDF 360 NDPKL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AM479142 | 0.0 | AM479142.1 Vitis vinifera, whole genome shotgun sequence, contig VV78X161484.7, clone ENTAV 115. |