 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
GSVIVT01026649001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
|
| Family |
Nin-like |
| Protein Properties |
Length: 161aa MW: 19169.5 Da PI: 10.446 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSVIVT01026649001 | genome | Genoscope | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 81.3 | 9.8e-26 | 12 | 61 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
++i ledl kyF+ p+ +A+++L+++lTvLKr+CR++GI+RWPhRkiksl
GSVIVT01026649001 12 AKIALEDLVKYFDVPMVEASRNLKIGLTVLKRKCREFGIPRWPHRKIKSL 61
689*********************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 161 aa
Download sequence Send
to blast |
MKKKRAASED VAKIALEDLV KYFDVPMVEA SRNLKIGLTV LKRKCREFGI PRWPHRKIKS 60
LDGLIRDLQE EAERQQLENK AAAMAVLKRQ RMLETEKECI EQRPFMEIED ETKRFRQDVF 120
KRRHRARALK NRDCFMFKQA IICSWLLSFY LFTFSKTLQE *
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AM466974 | 1e-111 | AM466974.1 Vitis vinifera, whole genome shotgun sequence, contig VV78X055211.2, clone ENTAV 115. |
