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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
GSVIVT01021627001 |
Common Name | LOC100854662, VIT_10s0003g04710 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
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Family |
BES1 |
Protein Properties |
Length: 182aa MW: 18980.2 Da PI: 9.4257 |
Description |
BES1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSVIVT01021627001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF822 | 110.5 | 2.8e-34 | 25 | 125 | 2 | 96 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssas..... 87
++ + ++ ++E++k RER+RR i++ i+ GLR++G+y+l raD+neVl+ L+ eAGw+v++DGttyr++ p a+ ++ a
GSVIVT01021627001 25 SGEKVRSVSDKEKTKMRERQRRSITTNIFHGLRKHGGYPLSPRADINEVLRHLASEAGWIVDPDGTTYRHSPTPSsGFASCPVCGAGkrsta 116
678899999************************************************************99999873333333222200000 PP
DUF822 88 aspesslqs 96
+p+ss+ +
GSVIVT01021627001 117 STPTSSVVL 125
333333333 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 182 aa
Download sequence Send
to blast |
MKDATAAAAM TSSGRGGGGG SGSGSGEKVR SVSDKEKTKM RERQRRSITT NIFHGLRKHG 60 GYPLSPRADI NEVLRHLASE AGWIVDPDGT TYRHSPTPSS GFASCPVCGA GKRSTASTPT 120 SSVVLGGECS TTTSPRRFQV GDSVLSPYLA GCGGSGVGDV VTSERDIPLA LYMYEKQYYI 180 I*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AM484589 | 1e-155 | AM484589.2 Vitis vinifera contig VV78X276804.4, whole genome shotgun sequence. |