 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
GSVIVT01021225001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
|
| Family |
G2-like |
| Protein Properties |
Length: 429aa MW: 49132.5 Da PI: 8.6211 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSVIVT01021225001 | genome | Genoscope | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.2 | 1.4e-31 | 84 | 137 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtp+LH +Fv+ave+LGG+ +AtPk +lelm+vkgL+++hvkSHLQ+YR+
GSVIVT01021225001 84 PRLRWTPDLHLSFVHAVERLGGQARATPKLVLELMNVKGLSIAHVKSHLQMYRS 137
8****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 429 aa
Download sequence Send
to blast |
MTERLFIHEE KNDGSKQEET ENTSFDLNEE SNSPEDDAAA EAEVSMEDDE GEREGSSANN 60
NNVSAGEKRR GKNSVRQYVR SKMPRLRWTP DLHLSFVHAV ERLGGQARAT PKLVLELMNV 120
KGLSIAHVKS HLQMYRSKRL DESGQVLCKT YRRMGGRDRD RDCSPGILFR PTGSCRHFSM 180
EKSGMEQAWN PGECSRSYNL LRCTLSQQQY DFRANSSRRQ QYASSQYYNA LRLSTSALQS 240
KQYFGQGNGP TRPSRFLEEK KWPPRELIGN PWREKTRTNA ASQSLVHQIC TTPRCVGATL 300
TYSKKPSEWS PANEERLGQF QSHLHYPKTI SSISTPQIEP PFRLESNQEK RLKEEEWLPD 360
LQLRLSQRSA NEEDTHHKSK YEMNTMLSLS PYSSRQQEQP TEKQKEETQT NAWPSQTTTG 420
KADLSLSI*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-16 | 85 | 139 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-16 | 85 | 139 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-16 | 85 | 139 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-16 | 85 | 139 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AM423436 | 1e-180 | AM423436.2 Vitis vinifera contig VV78X035624.19, whole genome shotgun sequence. |
