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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
GSVIVT01015462001 |
| Common Name | VIT_11s0016g04600 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
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| Family |
G2-like |
| Protein Properties |
Length: 399aa MW: 43871.9 Da PI: 7.6942 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSVIVT01015462001 | genome | Genoscope | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.7 | 4.8e-32 | 195 | 250 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
GSVIVT01015462001 195 KARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 250
68****************************************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009266 | Biological Process | response to temperature stimulus |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0010452 | Biological Process | histone H3-K36 methylation |
| GO:0048579 | Biological Process | negative regulation of long-day photoperiodism, flowering |
| GO:1903507 | Biological Process | negative regulation of nucleic acid-templated transcription |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MASPSELSLD CKPHSYSLLL KSFGDQPDQT QKLEDFLARL EEERLKIEVF KRELPLCMQL 60
LTDAVEASRQ QLQSYRANQG ARPFLEEFIP LKHSTPKGSE KTSNMSDKAN WMTSAQLWSP 120
AGDETKQQST LTSSKEPDIG FTVSPKLGFD NKQRNGGAFL PFSKERNSCP SPNLRNCEAQ 180
TTAAAPTANT QTHRKARRCW SPDLHRRFVN ALQMLGGSQV ATPKQIRELM KVDGLTNDEV 240
KSHLQKYRLH TRRPSPSPQA TGAAAPQLVV VGLGGIWVPP EYATAAHTGG TTLYGAHPPS 300
HTSPHYCGPP VPQDFYAAPA QPHHHSLHHQ LHMYKASPQT QSSPDSDMRG AGDRSESIED 360
GKSESSSWKG ESGENGGERK GLVTLRDDGE ESNRAMEV*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 1e-13 | 195 | 248 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 1e-13 | 195 | 248 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 1e-13 | 195 | 248 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-13 | 195 | 248 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-13 | 195 | 248 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-13 | 195 | 248 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 1e-13 | 195 | 248 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 1e-13 | 195 | 248 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 1e-13 | 195 | 248 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 1e-13 | 195 | 248 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 1e-13 | 195 | 248 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 1e-13 | 195 | 248 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed 3 days after germination, with a gradual decrease before the floral transition and remains at low levels afterward. {ECO:0000269|PubMed:25132385}. |
| Uniprot | TISSUE SPECIFICITY: Specifically expressed in vascular tissues of cotyledons, rosette leaves and cauline leaves. Not detected in the vegetative shoot apical meristem. {ECO:0000269|PubMed:25132385}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AM475597 | 0.0 | AM475597.2 Vitis vinifera contig VV78X169943.11, whole genome shotgun sequence. |
