 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
GSVIVT01014158001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
|
| Family |
BES1 |
| Protein Properties |
Length: 265aa MW: 29752.3 Da PI: 9.8048 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSVIVT01014158001 | genome | Genoscope | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 144.2 | 1.2e-44 | 92 | 171 | 1 | 82 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaa 82
++++r ptwkErEnn rRERrRRaiaaki++ LR++Gnyklpk++DnneVlkALc+ AGw+ve DGttyrk + ++++
GSVIVT01014158001 92 TSGTRLPTWKERENNNRRERRRRAIAAKIFSRLRMYGNYKLPKHCDNNEVLKALCNKAGWTVELDGTTYRKYRADN--SDHG 171
5899******************************************************************876665..4444 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MEEEVIHHLH HHHHNLNHNH VVHQFLSKPL QNGVVPPATS VHELLECPVC TNSMYPPIHQ 60
CHNGHTLCST CMLGGLEVET VSLWGWWVVG MTSGTRLPTW KERENNNRRE RRRRAIAAKI 120
FSRLRMYGNY KLPKHCDNNE VLKALCNKAG WTVELDGTTY RKYRADNSDH GGETRSPPVP 180
GTRYLGLTTP LAGGNWAGLG MGQIRCIVLL VGARLHGYGG MGHILMPNLF FNSFVQGKGF 240
RVAKKQLGSQ VVGVRLWTIF LKCN*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 2e-17 | 96 | 162 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 2e-17 | 96 | 162 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 2e-17 | 96 | 162 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 2e-17 | 96 | 162 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AM426448 | 1e-118 | AM426448.2 Vitis vinifera contig VV78X198422.9, whole genome shotgun sequence. |
