 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
GSVIVT01010762001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
|
| Family |
FAR1 |
| Protein Properties |
Length: 290aa MW: 33863.2 Da PI: 6.512 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| GSVIVT01010762001 | genome | Genoscope | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 85.9 | 6.1e-27 | 92 | 183 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90
+fY+ Y++++GF++r++++++s ++++i+ r+fvCskeg+r e+ + +++r +r+ tr gC+a+l++ +++gkw ++ +++eHnHel+
GSVIVT01010762001 92 EFYEMYGRRMGFTIRNNRTRRSLKDNSIIGREFVCSKEGFRVEKYAN-REHRIlpSRPITREGCNAMLRIAAKDEGKWAIYGFVKEHNHELN 182
6******************************************9998.33332459**********************************97 PP
FAR1 91 p 91
p
GSVIVT01010762001 183 P 183
5 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MRNLRVCLVI PPFPKWVLMA STSGQGFNPS RNYRRWLDET FDGHETAEDE LSDSLDGNDD 60
MVQQSIDNLP VSLEPLEPCV GMEFESAEDA REFYEMYGRR MGFTIRNNRT RRSLKDNSII 120
GREFVCSKEG FRVEKYANRE HRILPSRPIT REGCNAMLRI AAKDEGKWAI YGFVKEHNHE 180
LNPSKMPPRR SHRIAFCEDM RGHHWYGYVI SCTSLLFNTC PKDQKDLKIR ELSTELHRER 240
KKSAAYQEQL QTILKYIEEH THRLSLKVEI VVNNLRELES EEQDCSDSD*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AM465459 | 0.0 | AM465459.2 Vitis vinifera contig VV78X090921.11, whole genome shotgun sequence. |
