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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
GSVIVT01010761001 |
Common Name | LOC100853873, VIT_05s0102g00390 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
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Family |
FAR1 |
Protein Properties |
Length: 98aa MW: 11477 Da PI: 9.2873 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
GSVIVT01010761001 | genome | Genoscope | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 21.9 | 5.7e-07 | 1 | 26 | 65 | 90 |
FAR1 65 klkvkkekdgkwevtkleleHnHela 90
++ vk+ek gkw+vtk++ eHnH+l+
GSVIVT01010761001 1 MILVKREKLGKWVVTKFVREHNHPLV 26
68899999****************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009585 | Biological Process | red, far-red light phototransduction |
GO:0010018 | Biological Process | far-red light signaling pathway |
GO:0042753 | Biological Process | positive regulation of circadian rhythm |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AM465459 | 7e-97 | AM465459.2 Vitis vinifera contig VV78X090921.11, whole genome shotgun sequence. |