PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSVIVT01009485001
Organism
Vitis vinifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
Family bZIP
Protein Properties Length: 264aa    MW: 28375.4 Da    PI: 10.3121
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSVIVT01009485001genomeGenoscopeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.3e-14185237557
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                        +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+++N++L k+  e+ ++ +
  GSVIVT01009485001 185 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEKNEELEKKQAEMMEMQK 237
                        69***************************************988887777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.9E-12181245IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.047183234IPR004827Basic-leucine zipper domain
CDDcd147071.40E-18185216No hitNo description
Gene3DG3DSA:1.20.5.1702.8E-14185235No hitNo description
PfamPF001701.8E-12185237IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.14E-11185235No hitNo description
PROSITE patternPS000360188203IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MNMDELLKNI WSAEEAQTMA ARQGSLTLPR TLTGGSNLPQ RQPTLGEMTL EEFLVRAGVV  60
REDTQLAGKP NNGGFFGDLA NLGNGNGLGI AFQQMGIRNG MVGISDSGIN GNLVQSSVLH  120
GGGMGMVGLG AGGATIASGS PANQSSDGIG KSNGDTSSVS PVPYAFNGGI RGRKCSGAVE  180
KVIERRQRRM IKNRESAARS RARKQAYTME LEAEVAKLKE KNEELEKKQA EMMEMQKNQV  240
MEMMNLQREV KKRCLRRTLT GPW*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Vvi.861e-75flower| fruit| inflorescence
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, leaves, flowers and siliques but not in seeds. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313}.
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ2379920.0AJ237992.1 Vitis vinifera mRNA for putative ripening-related bZIP protein (grip55 gene).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021601955.11e-109bZIP transcription factor 23-like isoform X1
SwissprotQ9M7Q46e-80AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A251IQF61e-108A0A251IQF6_MANES; Uncharacterized protein
STRINGcassava4.1_007256m1e-108(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP39841024
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.13e-40abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]