PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Publication

Basic Information? help Back to Top

TF ID

GSMUA_AchrUn_randomP26830_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

G2-like

Protein Properties

Length: 98aa MW: 11115.7 Da PI: 10.4215

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_AchrUn_randomP26830_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	25.4	3.2e-08	1	20	36	55
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+ +gL +h+kSHLQkYRl GSMUA_AchrUn_randomP26830_001 1 MGTNGLMFYHLKSHLQKYRL 20 8999***************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.2E-6	1	21	IPR009057	Homeodomain-like
Pfam	PF14379	1.1E-14	65	98	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 98 aa Download sequence Send to blast
MGTNGLMFYH LKSHLQKYRL GKQTRRETSQ EAKKNGSNSS KTNCSSTTNS DVSRTDGVGE 60 ILLGEALRYQ IEVQRKLQEQ LVVQKKLQMR IEALGKCL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009387599.1	6e-66	PREDICTED: myb family transcription factor PHL11-like isoform X2
Swissprot	C0SVS4	2e-21	PHLB_ARATH; Myb family transcription factor PHL11
TrEMBL	M0UCP1	1e-64	M0UCP1_MUSAM; Uncharacterized protein
STRING	GSMUA_AchrUn_randomP26830_001	2e-65	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3940	34	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	5e-10	G2-like family protein

Publications ? help Back to Top
Petridis A,Döll S,Nichelmann L,Bilger W,Mock HP Arabidopsis thaliana G2-LIKE FLAVONOID REGULATOR and BRASSINOSTEROID ENHANCED EXPRESSION1 are low-temperature regulators of flavonoid accumulation. New Phytol., 2016. 211(3): p. 912-25 [PMID:27125220]